Protein ZmMYBR1 | |
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Information | |
TF Name: | ZmMYBR1 |
Species: | Maize |
TF Family: | MYB-related |
Gene Name(Synonym): | MRP1 |
Uniprot ID: | K7V5I7 |
ZmMYBR1 is a protein in the MYB-related family.
Overview of domains present in v5 transcripts | |
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PF00249 | |
Zm00001eb354390_T001 |
Gene ID | Type | MEME Logo | Sequence | FIMO | Position |
---|---|---|---|---|---|
Zm00001d010889 | DAPseq | sequence | fimo | position | |
Zm00001d010889 | DAPseq | sequence | fimo | position | |
Zm00001d010889 | ChIPseq | sequence | fimo | position | |
Zm00001d010889 | PChIPseq | sequence | fimo | position |
MNPNFNSVWSAPEINMMNSLITSHIANNTYTNNQHVVASRSAIVNHNNFGMPTEVVPPVDNMDMMQGYLMDDTDAMRLVQ
GQQHMPNVVPNQRRHAVKFWTTDEHRNFLRGLEVFGRGKWKNISKYFVPTRTPVQISSHAQKYFRRQECTTEKQRFSIND
VGLYDTQPWVRQNNSSSSWEALTFTAGRAYNNTNYCAFNSLPYASSQASNNQVATWITDQQATASSSIAPPATEESQIYN
R
MNPNFNSVWSAPEINMMNSLITSHIANNTYTNNQHVVASRSAIVNHNNFGMPTEVVPPVDNMDMMQGYLMDDTDAMRLVQ
GQQHMPNVVPNQRRHAVKFWTTDEHRNFLRGLEVFGRGKWKNISKYFVPTRTPVQISSHAQKYFRRQECTTEKQRFSIND
VGLYDTQPWVRQNNSSSSWEALTFTAGRAYNNTNYCAFNSLPYASSQASNNQVATWITDQQATASSSIAPPATEESQIYN
R
MNPNFNSVWSAPEINMMNSLITSHIANNTYTNNQHVVASRSAIVNHNNFGMPTEVVPPVDNMDMMQGYLMDDTDAMRLVQ
GQQHMPNVVPNQRRHAVKFWTTDEHRNFLRGLEVFGRGKWKNISKYFVPTRTPVQISSHAQKYFRRQECTTEKQRFSIND
VGLYDTQPWVRQNNSSSSWEALTFTAGRAYNNTNYCAFNSLPYASSQASNNQVATWITDQQATASSSIAPPATEESQIYN
R
MNPNFNSVWSAPEINMMNSLITSHIANNTYTNNQHVVASRSAIVNHNNFGMPTEVVPPVDNMDMMQGYLMDDTDAMRLVQ
GQQHMPNVVPNQRRHAVKFWTTDEHRNFLRGLEVFGRGKWKNISKYFVPTRTPVQISSHAQKYFRRQECTTEKQRFSIND
VGLYDTQPWVRQNNSSSSWEALTFTAGRAYNNTNYCAFNSLPYASSQASNNQVATWITDQQATASSSIAPPATEESQIYN
R
MNPNFNSVWSAPEINMMNSLITSHIANNTYTNNQHVVASRSAIVNHNNFGMPTEVVPPVDNMDMMQGYLMDDTDAMRLVQ
GQQHMPNVVPNQRRHAVKFWTTDEHRNFLRGLEVFGRGKWKNISKYFVPTRTPVQISSHAQKYFRRQECTTEKQRFSIND
VGLYDTQPWVRQNNSSSSWEALTFTAGRAYNNTNYCAFNSLPYASSQASNNQVATWITDQQATASSSIAPPATEESQIYN
R
Secondary Structure Color Code | |
---|---|
BEND | region with high backbone curvature without specific hydrogen bonding |
HELX_LH_PP_P | left-handed polyproline helix |
HELX_RH_3T_P | right-handed 3-10 helix |
HELX_RH_AL_P | right-handed alpha helix |
HELX_RH_PI_P | right-handed pi helix |
STRN | beta strand |
TURN_TY1_P | type I turn |
UNDETERMINED | no data available |
Domains Present | |
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PF00249 |
|
Hover here to show all domains |
ACATCCAAACACTGTAACAACTTGT...
ACATCCAAACACTGTAACAACTTGTGTAGTACTTAATCCCTCGCACCTCATGAATCCCAACTTCAACAGTGTGTGGAGCGCTCCCGAGATCAATATGATGAACTCACTCATCACTAGTCACATCGCCAACAACACCTACACAAACAACCAGCATGTTGTGGCAAGTCGTAGTGCCATTGTGAACCACAATAACTTTGGGATGCCAACGGAGGTCGTTCCACCCGTGGACAACATGGACATGATGCAAGGCTATCTAATGGATGATACGGATGCCATGAGGCTTGTTCAGGGACAACAACATATGCCAAATGTTGTTCCTAATCAAAGGAGGCATGCAGTGAAGTTTTGGACTACAGATGAGCACAGGAATTTCCTTCGTGGTCTAGAAGTGTTTGGCCGTGGTAAATGGAAGAACATCTCCAAGTACTTCGTCCCCACAAGGACACCAGTGCAGATCTCTAGCCATGCACAGAAGTATTTCCGCAGGCAGGAGTGCACCACAGAGAAACAACGCTTTAGCATCAACGATGTTGGCCTCTACGACACACAGCCATGGGTGCGGCAGAACAACTCCTCTAGCAGCTGGGAGGCGCTCACCTTCACTGCTGGCCGTGCGTACAATAATACAAACTACTGTGCCTTTAACAGCCTCCCGTATGCCAGCAGCCAGGCAAGTAACAACCAGGTAGCTACATGGATTACAGACCAGCAGGCAACTGCAAGTTCTTCTATAGCTCCTCCAGCGACGGAGGAGAGCCAGATATATAACCGATAATATATATAATGGTCATCAGCAGCTGGGAGAGGCTTTCTTCATATATAATCAATAGGTAGATAGATATGGACAACGTCCATTGACTAGTTTAATTTCTATCTATATGTTTTGTATCCAATGATGCATGTAAAACCTAGTTGGTTGTTAAAGGTCATTAGTACCATACTATATATGGGCTAGAAACAGTTTCATTGAAATTTGCCCCTGAGCAATACAATGAAATTTTACCAATGTGTTATT
MNPNFNSVWSAPEINMMNSLITSHIANNTYTNNQHVVASRSAIVNHNNFGMPTEVVPPVDNMDMMQGYLMDDTDAMRLVQ
GQQHMPNVVPNQRRHAVKFWTTDEHRNFLRGLEVFGRGKWKNISKYFVPTRTPVQISSHAQKYFRRQECTTEKQRFSIND
VGLYDTQPWVRQNNSSSSWEALTFTAGRAYNNTNYCAFNSLPYASSQASNNQVATWITDQQATASSSIAPPATEESQIYN
R
ACATCCAAACACTGTAACAACTTGT...
ACATCCAAACACTGTAACAACTTGTGTAGTACTTAATCCCTCGCACCTCATGAATCCCAACTTCAACAGTGTGTGGAGCGCTCCCGAGATCAATATGATGAACTCACTCATCACTAGTCACATCGCCAACAACACCTACACAAACAACCAGCATGTTGTGGCAAGTCGTAGTGCCATTGTGAACCACAATAACTTTGGGATGCCAACGGAGGTCGTTCCACCCGTGGACAACATGGACATGATGCAAGGCTATCTAATGGATGATACGGATGCCATGAGGCTTGTTCAGGGACAACAACATATGCCAAATGTTGTTCCTAATCAAAGGAGGCATGCAGTGAAGTTTTGGACTACAGATGAGCACAGGAATTTCCTTCGTGGTCTAGAAGTGTTTGGCCGTGGTAAATGGAAGAACATCTCCAAGTACTTCGTCCCCACAAGGACACCAGTGCAGATCTCTAGCCATGCACAGAAGTATTTCCGCAGGCAGGAGTGCACCACAGAGAAACAACGCTTTAGCATCAACGATGTTGGCCTCTACGACACACAGCCATGGGTGCGGCAGAACAACTCCTCTAGCAGCTGGGAGGCGCTCACCTTCACTGCTGGCCGTGCGTACAATAATACAAACTACTGTGCCTTTAACAGCCTCCCGTATGCCAGCAGCCAGGCAAGTAACAACCAGGTAGCTACATGGATTACAGACCAGCAGGCAACTGCAAGTTCTTCTATAGCTCCTCCAGCGACGGAGGAGAGCCAGATATATAACCGATAATATATATAATGGTCATCAGCAGCTGGGAGAGGCTTTCTTCATATATAATCAATAGGTAGATAGATATGGACAACGTCCATTGACTAGTTTAATTTCTATCTATATGTTTTGTATCCAATGATGCATGTAAAACCTAGTTGGTTGTTAAAGGTCATTAGTACCATACTATATATGGGCTAGAAACAGTTTCATTGAAATTTGCCCCTGAGCAATACAATGAAATTTTACCAATGTGTTATTTATATATTAATGTGTCTA
MNPNFNSVWSAPEINMMNSLITSHIANNTYTNNQHVVASRSAIVNHNNFGMPTEVVPPVDNMDMMQGYLMDDTDAMRLVQ
GQQHMPNVVPNQRRHAVKFWTTDEHRNFLRGLEVFGRGKWKNISKYFVPTRTPVQISSHAQKYFRRQECTTEKQRFSIND
VGLYDTQPWVRQNNSSSSWEALTFTAGRAYNNTNYCAFNSLPYASSQASNNQVATWITDQQATASSSIAPPATEESQIYN
R
ACATCCAAACACTGTAACAACTTGT...
ACATCCAAACACTGTAACAACTTGTGTAGTACTTAATCCCTCGCACCTCATGAATCCCAACTTCAACAGTGTGTGGAGCGCTCCCGAGATCAATATGATGAACTCACTCATCACTAGTCACATCGCCAACAACACCTACACAAACAACCAGCATGTTGTGGCAAGTCGTAGTGCCATTGTGAACCACAATAACTTTGGGATGCCAACGGAGGTCGTTCCACCCGTGGACAACATGGACATGATGCAAGGCTATCTAATGGATGATACGGATGCCATGAGGCTTGTTCAGGGACAACAACATATGCCAAATGTTGTTCCTAATCAAAGGAGGCATGCAGTGAAGTTTTGGACTACAGATGAGCACAGGAATTTCCTTCGTGGTCTAGAAGTGTTTGGCCGTGGTAAATGGAAGAACATCTCCAAGTACTTCGTCCCCACAAGGACACCAGTGCAGATCTCTAGCCATGCACAGAAGTATTTCCGCAGGCAGGAGTGCACCACAGAGAAACAACGCTTTAGCATCAACGATGTTGGCCTCTACGACACACAGCCATGGGTGCGGCAGAACAACTCCTCTAGCAGCTGGGAGGCGCTCACCTTCACTGCTGGCCGTGCGTACAATAATACAAACTACTGTGCCTTTAACAGCCTCCCGTATGCCAGCAGCCAGGCAAGTAACAACCAGGTAGCTACATGGATTACAGACCAGCAGGCAACTGCAAGTTCTTCTATAGCTCCTCCAGCGACGGAGGAGAGCCAGATATATAACCGATAATATATATAATGGTCATCAGCAGCTGGGAGAGGCTTTCTTCATATATAATCAATAGGTAGATAGATATGGACAACGTCCATTGACTAGTTTAATTTCTATCTATATGTTTTGTATCCAATGATGCATGTAAAACCTAGTTGGTTGTTAAAGGTCATTAGTACCATACTATATATGGGCTAGAAACAGTTTCATTGAAATTTGCCCCTGAGCAATACAATGAAATTTT
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